Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015808557.1_cds_XP_016495401.1_9719
CDS Infomation

[gene=LOC107814486] [db_xref=GeneID:107814486] [protein=mannan synthase 1-like isoform X2] [protein_id=XP_016495401.1] [location=complement(join(8297..8456,8582..8776,8870..9069,9160..9273,9357..9493,9587..9697,10058..10310,10395..10493,11712..12026))] [gbkey=CDS]
Sequence

ATGAGAAATCTCATTTTCGAAGAACCTGGGATCAGAGTAAATACCAATACTACTCAAAGT
ATAAATCATGCCTGGGAGCGGATACGAGTTCCAGTAGTTGTGCCTGCTCTACATCTTGCA
ATGTATATATGCATAGGGATGTCCATCATGCTCTTCCTTGAGCGCATTTACATGGCAATA
GTGATCGCAGGGGTCAAGTGCTTTGGAAGGAAAAGATATACGAAGTATAAGCTCGAGTCT
GTAAAAGAAGACCTAGAGAAGCACAAAAACTACCCAATGGTGTTGGTCCAAATACCTATG
TTCAACGAAAAGGAGGTTTACAAGCTCTCTATTGGAGCTGTATGTGGCTTGTCATGGCCA
TCAGATAGGCTCATTGTGCAGGTTCTTGATGACTCCACCAATGAAGTTTTAAGGACATTA
GTGGACTTGGAATGTCGAAAGTGGATAGAGAGAGGGATAAACGTGAAATACGAAACAAGA
AACAACAGGAATGGCTACAAAGCGGGTGCTCTCAAGGAAGGTCTAAAGAAGCAGTATGTT
GATGACTGTGAGTTTGTTGTGATCTTTGATGCAGACTTTCAGCCTGATGAAGACTTTCTT
TGGAGGACCATACCATATCTTCTCGACAACCCAGAATTGGCTTTGGTTCAAGCCAGATGG
AAATTTGTTAATGCAGATGAATGTCTGATGACTCGACTCCAGGAGATGTCATTGGACTAT
CACTTCAGTGTTGAGCAAGAAGTTGGCTCGTCAACATGTTCATTCTTTGGGTTCAACGGG
ACTGCTGGCGTCTGGAGAATTCAAGCAGTGAATGATGCTGGTGGATGGAAAGACAGGACC
ACAGTAGAGGACATGGATCTTGCAGTCAGGGCTAGCCTTAAGGGTTGGAAATTTGTGTTT
GTGGGTGACCTAGCTGTCAAGAACGAACTCCCAAGTACCTTCAAGGCTTATAGATTTCAG
CAGCACCGCTGGTCGTGTGGCCCAGCTAACCTCTTTCGCAAGATGATGAAAGAGATCATG
CTTTGCGAGCGTGTATCAATCTGGAAGAAGTTTCATCTCATCTACGGCTTCTTCTTTGTG
AGGAAGATTATTGCACACTGGGTTACTTTTTTCTTTTACTGTGTTGTCATTCCAGCAACT
ATCTTAGTGCCTGAAGTCCATCTTACAAAGCCTCTAGCTATATATCTTCCAGCAACCATT
ACCATTCTTAATGCCGCTTGCACACCAAGATCTTTCCATCTTCTTGTATTCTGGATCCTA
TTCGAGAACGTCATGTCTCTCCATCGATCTAAGGCAACAATAATAGGACTCTTAGAAGCC
AACCGAGTAAATGAATGGGTTGTAACTGAGAAGCTGGGGAACATGATGAAGCAAAAGTAT
AGTGCCAAGGCATCAAAGAGACCAAGATCGAGGATAGGTGAAAGGATTCATGTCTTAGAG
CTGCTAATGGGAATGTATATGCTATACTGTGCTATATACAACATGCTATTTGGAAATGAT
CACTTTTTCATATACCTGTTCCTGCAAGCAGGAGCTTTCTTCATCGTTGGAGTAGGGTAT
GTTGGAACATTTGTCCCCAATTAG

Peptide Sequence

PEP ID

XP_016495401.1
PEP Infomation

PREDICTED: mannan synthase 1-like isoform X2 [Nicotiana tabacum]
Sequence

MRNLIFEEPGIRVNTNTTQSINHAWERIRVPVVVPALHLAMYICIGMSIMLFLERIYMAI
VIAGVKCFGRKRYTKYKLESVKEDLEKHKNYPMVLVQIPMFNEKEVYKLSIGAVCGLSWP
SDRLIVQVLDDSTNEVLRTLVDLECRKWIERGINVKYETRNNRNGYKAGALKEGLKKQYV
DDCEFVVIFDADFQPDEDFLWRTIPYLLDNPELALVQARWKFVNADECLMTRLQEMSLDY
HFSVEQEVGSSTCSFFGFNGTAGVWRIQAVNDAGGWKDRTTVEDMDLAVRASLKGWKFVF
VGDLAVKNELPSTFKAYRFQQHRWSCGPANLFRKMMKEIMLCERVSIWKKFHLIYGFFFV
RKIIAHWVTFFFYCVVIPATILVPEVHLTKPLAIYLPATITILNAACTPRSFHLLVFWIL
FENVMSLHRSKATIIGLLEANRVNEWVVTEKLGNMMKQKYSAKASKRPRSRIGERIHVLE
LLMGMYMLYCAIYNMLFGNDHFFIYLFLQAGAFFIVGVGYVGTFVPN

Transcript Sequence

Gene sequence data has not been registered.